PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_015230_mzro.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 336aa    MW: 37566.7 Da    PI: 4.6738
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_015230_mzro.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.2e-092603001055
                         HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         r+RR riN+++  L+ l+P+      +K++ +++Le+A +Y+k Lq
  Bv1_015230_mzro.t1 260 RKRRMRINERLRILQNLVPNG-----TKVDISTMLEEAFHYVKFLQ 300
                         9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.56250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-12251314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-10255308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-8256305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.03E-9259304No hitNo description
PfamPF000104.2E-6260300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MGAFLDGEWE SICKLFTVDE SPDLSANLFE YSSPANELDE SPAFAASSSF SHVDINSFST  60
LSGWISKPPH NFLETRKHTN TDSFADNFLP EATDILSCID FSMVNGEIDG LFSLPFLQNT  120
RNDTMSGDDD VHTNNAVNMS SATTELTLKR KREVPLLQDN KDEKTSLMET PKKNARTSKH  180
GLKDKKKANQ KTEEEITATV ITKETNENAD SNSDDSIPCA SEEITETEDS NSNISVSQSS  240
TGKKRANRGA ATDPQSLYAR KRRMRINERL RILQNLVPNG TKVDISTMLE EAFHYVKFLQ  300
LQIRLLSSDD LWMYAPLAYN GLDVGAFQRM SPFFSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242262KKRANRGAATDPQSLYARKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010688183.10.0PREDICTED: transcription factor bHLH54-like
SwissprotQ84WK04e-50BH085_ARATH; Transcription factor bHLH85
TrEMBLA0A0J8FTW10.0A0A0J8FTW1_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-50ROOT HAIR DEFECTIVE 6-LIKE 2